ResearcherID.com
ResearcherID Thomson Reuters  

Neshich, Goran
Create a ResearcherID badge for this researcher View publications analytics for this researcher
Close
ResearcherID: C-3946-2013
URL: http://www.researcherid.com/rid/C-3946-2013
My Institutions (more details)
Primary Institution:
Sub-org/Dept:
Role:
 
 

This list contains papers that I have authored.

publication(s)  
First Page Previous Page Page   of  1  Go Next Page Last Page
  Sort by:    Results per page: 
1. Title: STING Millennium: a web-based suite of programs for comprehensive and simultaneous analysis of protein structure and sequence
Author(s): Neshich, G; Togawa, RC; Mancini, AL; et al.
Source: Nucleic Acids Research Volume: 31 Issue: 13 Pages: 3386-3392 Published: JUL 1 2003
Times Cited: 34
DOI: 10.1093/nar/gkg578
added
11-Mar-13
2. Title: STING Millennium Suite: integrated software for extensive analyses of 3d structures of proteins and their complexes
Author(s): Higa, RH; Togawa, RC; Montagner, AJ; et al.
Source: Bmc Bioinformatics Volume: 5 Published: AUG 9 2004
Times Cited: 18
DOI: 10.1186/1471-2105-5-107
added
11-Mar-13
3. Title: Design and synthesis of germline-based hemi-humanized single-chain Fv against the CD18 surface antigen
Author(s): Caldas, C; Coelho, VPCV; Rigden, DJ; et al.
Source: Protein Engineering Volume: 13 Issue: 5 Pages: 353-360 Published: MAY 2000
Times Cited: 18
DOI: 10.1093/protein/13.5.353
added
11-Mar-13
4. Title: A CORM-SPECIFIC GENE ENCODES TARIN, A MAJOR GLOBULIN OF TARO (COLOCASIA-ESCULENTA L SCHOTT)
Author(s): BEZERRA, IC; CASTRO, LAB; NESHICH, G; et al.
Source: Plant Molecular Biology Volume: 28 Issue: 1 Pages: 137-144 Published: APR 1995
Times Cited: 17
DOI: 10.1007/BF00042045
added
11-Mar-13
5. Title: (Java)Protein Dossier: a novel web-based data visualization tool for comprehensive analysis of protein structure
Author(s): Neshich, G; Rocchia, W; Mancini, AL; et al.
Source: Nucleic Acids Research Volume: 32 Pages: W595-W601 Published: JUL 1 2004
Times Cited: 16
DOI: 10.1093/nar/gkh480
added
11-Mar-13
6. Title: Analysis of structural and physico-chemical parameters involved in the specificity of binding between alpha-amylases and their inhibitors
Author(s): Da Silva, MCM; de Sa, MFG; Chrispeels, MJ; et al.
Source: Protein Engineering Volume: 13 Issue: 3 Pages: 167-177 Published: MAR 2000
Times Cited: 16
DOI: 10.1093/protein/13.3.167
added
11-Mar-13
7. Title: Protein cutoff scanning: A comparative analysis of cutoff dependent and cutoff free methods for prospecting contacts in proteins
Author(s): da Silveira, Carlos H.; Pires, Douglas E. V.; Minardi, Raquel C.; et al.
Source: Proteins-Structure Function and Bioinformatics Volume: 74 Issue: 3 Pages: 727-743 Published: FEB 15 2009
Times Cited: 15
DOI: 10.1002/prot.22187
added
11-Mar-13
8. Title: Predicting enzyme class from protein structure using Bayesian classification
Author(s): Borro, Luiz C.; Oliveira, Stanley R. M.; Yamagishi, Michel E. B.; et al.
Source: Genetics and Molecular Research Volume: 5 Issue: 1 Pages: 193-202 Published: 2006
Times Cited: 15
added
11-Mar-13
9. Title: ACGT and vicilin core sequences in a promoter domain required for seed-specific expression of a 2S storage protein gene are recognized by the opaque-2 regulatory protein
Author(s): Vincentz, M; Leite, A; Neshich, G; et al.
Source: Plant Molecular Biology Volume: 34 Issue: 6 Pages: 879-889 Published: AUG 1997
Times Cited: 15
DOI: 10.1023/A:1005874404706
added
11-Mar-13
10. Title: The diamond STING server
Author(s): Neshich, G; Borro, LC; Higa, RH; et al.
Source: Nucleic Acids Research Volume: 33 Pages: W29-W35 Published: JUL 1 2005
Times Cited: 13
DOI: 10.1093/nar/gki397
added
11-Mar-13
11. Title: STING report: convenient web-based application for graphic and tabular presentations of protein sequence, structure and function descriptors from the STING database
Author(s): Neshich, G; Mancini, AL; Yamagishi, MEB; et al.
Source: Nucleic Acids Research Volume: 33 Pages: D269-D274 Published: JAN 1 2005
Times Cited: 12
DOI: 10.1093/narl/gki111
added
11-Mar-13
12. Title: Structural basis of the lisinopril-binding specificity in N- and C-domains of human somatic ACE
Author(s): Fernandez, JH; Hayashi, MAF; Camargo, ACM; et al.
Source: Biochemical and Biophysical Research Communications Volume: 308 Issue: 2 Pages: 219-226 Published: AUG 22 2003
Times Cited: 12
DOI: 10.1016/S0006-291X(03)01363-9
added
11-Mar-13
13. Title: Modified 2S albumins with improved tryptophan content are correctly expressed in transgenic tobacco plants
Author(s): Marcellino, LH; Neshich, G; GrossideSa, MF; et al.
Source: Febs Letters Volume: 385 Issue: 3 Pages: 154-158 Published: MAY 6 1996
Times Cited: 11
DOI: 10.1016/0014-5793(96)00375-4
added
11-Mar-13
14. Title: Single nucleotide polymorphisms identification in expressed genes of Schistosoma mansoni
Author(s): Simoes, Mariana; Bahia, Diana; Zerlotini, Adhemar; et al.
Source: Molecular and Biochemical Parasitology Volume: 154 Issue: 2 Pages: 134-140 Published: AUG 2007
Times Cited: 10
DOI: 10.1016/j.molbiopara.2007.04.003
added
11-Mar-13
15. Title: STING Contacts: a web-based application for identification and analysis of amino acid contacts within protein structure and across protein interfaces
Author(s): Mancini, AL; Higa, RH; Oliveira, A; et al.
Source: Bioinformatics Volume: 20 Issue: 13 Pages: 2145-2147 Published: SEP 1 2004
Times Cited: 10
DOI: 10.1093/bioinformatics/bth203
added
11-Mar-13
16. Title: Analysis of the black-eyed pea trypsin and chymotrypsin inhibitor alpha-chymotrypsin complex
Author(s): deFreitas, SM; deMello, LV; daSilva, MCM; et al.
Source: Febs Letters Volume: 409 Issue: 2 Pages: 121-127 Published: JUN 9 1997
Times Cited: 10
DOI: 10.1016/S0014-5793(97)00419-5
added
11-Mar-13
17. Title: The Star STING server: a multiplatform environment for protein structure analysis
Author(s): Neshich, G.; Mazoni, I.; Oliveira, S. R. M.; et al.
Source: Genetics and Molecular Research Volume: 5 Issue: 4 Pages: 717-722 Published: 2006
Times Cited: 9
added
11-Mar-13
18. Title: Crystallographic structure and substrate-binding interactions of the molybdate-binding protein of the phytopathogen Xanthomonas axonopodis pv. citri
Author(s): Balan, Andrea; Santacruz-Perez, Carolina; Moutran, Alexandre; et al.
Source: Biochimica Et Biophysica Acta-Proteins and Proteomics Volume: 1784 Issue: 2 Pages: 393-399 Published: FEB 2008
Times Cited: 8
DOI: 10.1016/j.bbapap.2007.11.013
added
11-Mar-13
19. Title: A fast surface-matching procedure for protein-ligand docking
Author(s): Yamagishi, Michel E. B.; Martins, Natalia F.; Neshich, Goran; et al.
Source: Journal of Molecular Modeling Volume: 12 Issue: 6 Pages: 965-972 Published: SEP 2006
Times Cited: 6
DOI: 10.1007/s00894-006-0109-z
added
11-Mar-13
20. Title: Proteinase inhibition using small Bowman-Birk-type structures
Author(s): Fernandez, J. H.; Mello, M. O.; Galgaro, L.; et al.
Source: Genetics and Molecular Research Volume: 6 Issue: 4 Pages: 846-858 Published: 2007
Times Cited: 5
added
11-Mar-13
21. Title: ConSSeq: a web-based application for analysis of amino acid conservation based on HSSP database and within context of structure
Author(s): Higa, RH; Montagner, AJ; Togawa, RC; et al.
Source: Bioinformatics Volume: 20 Issue: 12 Pages: 1983-1985 Published: AUG 12 2004
Times Cited: 5
DOI: 10.1093/bioinformatics/bth185
added
11-Mar-13
22. Title: DELAYED FLUORESCENCE AS AN INSITU PROBE OF FLUIDITY CHANGES IN MAIZE PHOTOSYNTHETIC MEMBRANES
Author(s): VUCINIC, Z; NESIC, G; RADENOVIC, C
Source: Periodicum Biologorum Volume: 84 Issue: 2 Pages: 223-226 Published: 1982
Times Cited: 5
added
11-Mar-13
23. Title: Finding protein-protein interaction patterns by contact map matching
Author(s): Melo, R. C.; Ribeiro, C.; Murray, C. S.; et al.
Source: Genetics and Molecular Research Volume: 6 Issue: 4 Pages: 946-963 Published: 2007
Times Cited: 4
added
11-Mar-13
24. Title: Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors
Author(s): Ribeiro, Cristina; Togawa, Roberto C.; Neshich, Izabella A. P.; et al.
Source: Bmc Structural Biology Volume: 10 Published: OCT 20 2010
Times Cited: 3
DOI: 10.1186/1472-6807-10-36
added
11-Mar-13
25. Title: Defining 3D residue environment in protein structures using SCORPION and FORMIGA
Author(s): Higa, RH; Oliveira, AG; Horita, LG; et al.
Source: Bioinformatics Volume: 20 Issue: 12 Pages: 1989-1991 Published: AUG 12 2004
Times Cited: 3
DOI: 10.1093/bioinformatics/bth190
added
11-Mar-13
26. Title: Computational biology in Brazil
Author(s): Neshich, Goran
Source: Plos Computational Biology Volume: 3 Issue: 10 Pages: 1845-1848 Published: OCT 2007
Times Cited: 2
DOI: 10.1371/journal.pcbi.0030185
added
11-Mar-13
27. Title: Building multiple sequence alignments with a flavor of HSSP alignments
Author(s): Higa, Roberto Hiroshi; Braga da Cruz, Sergio Aparecido; Kuser, Paula Regina; et al.
Source: Genetics and Molecular Research Volume: 5 Issue: 1 Pages: 127-137 Published: 2006
Times Cited: 2
added
11-Mar-13
28. Title: Mutants of common bean alpha-amylase inhibitor-2 as an approach to investigate binding specificity to alpha-amylases
Author(s): da Silva, MCM; Mello, LV; Coutinho, MV; et al.
Source: Pesquisa Agropecuaria Brasileira Volume: 39 Issue: 3 Pages: 201-208 Published: MAR 2004
Times Cited: 2
added
11-Mar-13
29. Title: Amino acid sequence of the Phaseolus vulgaris var ''Fogo na Serra'' inhibitor and interactive surface modeling for the enzyme-inhibitor complex
Author(s): deCarvalho, PGB; Bloch, C; Morhy, L; et al.
Source: Journal of Protein Chemistry Volume: 15 Issue: 6 Pages: 591-598 Published: AUG 1996
Times Cited: 2
added
11-Mar-13
30. Title: AN ELECTRON-PARAMAGNETIC-RES STUDY OF TEMPERATURE-DEPENDENT CHANGES IN FLUIDITY OF ISOLATED MAIZE THYLAKOIDS
Author(s): NESIC, G; SCHARA, M; SENTJURC, M; et al.
Source: Periodicum Biologorum Volume: 84 Issue: 2 Pages: 166-169 Published: 1982
Times Cited: 2
added
11-Mar-13
31. Title: Electrostatic potential calculation for biomolecules - creating a database of pre-calculated values reported on a per residue basis for all PDB protein structures
Author(s): Rocchia, W.; Neshich, G.
Source: Genetics and Molecular Research Volume: 6 Issue: 4 Pages: 923-936 Published: 2007
Times Cited: 1
added
11-Mar-13
32. Title: Sting_RDB: a relational database of structural parameters for protein analysis with support for data warehousing and data mining
Author(s): Oliveira, S. R. M.; Almeida, G. V.; Souza, K. R. R.; et al.
Source: Genetics and Molecular Research Volume: 6 Issue: 4 Pages: 911-922 Published: 2007
Times Cited: 1
added
11-Mar-13
33. Title: Using linear algebra for protein structural comparison and classification
Author(s): Gomide, Janaina; Melo-Minardi, Raquel; dos Santos, Marcos Augusto; et al.
Source: Genetics and Molecular Biology Volume: 32 Issue: 3 Pages: 645-651 Published: 2009
Times Cited: 0
added
11-Mar-13
34. Title: PDB-Metrics: a Web tool for exploring the PDB contents
Author(s): Fileto, Renato; Kuser, Paula R.; Yamagishi, Michel E. B.; et al.
Source: Genetics and Molecular Research Volume: 5 Issue: 2 Pages: 333-341 Published: 2006
Times Cited: 0
added
11-Mar-13
35. Title: An opaque-2-like transcription factor from pearl millet
Author(s): Marcellino, LH; Neshich, G; Neto, AF; et al.
Source: Protein and Peptide Letters Volume: 11 Issue: 4 Pages: 345-352 Published: AUG 2004
Times Cited: 0
DOI: 10.2174/0929866043407002
added
11-Mar-13
36. Title: A new field-tested electronic system for data gathering, recording, transfer and dissemination via the World Wide Web
Author(s): Cavalcanti, TB; Rezende, A; Togawa, R; et al.
Source: Taxon Volume: 47 Issue: 2 Pages: 381-386 Published: MAY 1998
Times Cited: 0
DOI: 10.2307/1223766
added
11-Mar-13
37. Title: Method for identifying target for computer-based design of drugs against PilT protein of citrus variegated chlorosis and Pierce's disease causing bacteria, involves selecting amino acid sequence containing PilT protein monomer
Patent Number(s): WO2012031343-A3
Patent Assignee: EMPRESA BRASIL PESQUISA AGROPECUARIA
Inventor(s): AGOSTINHO PENA NESHICH I; JARDINE J G; MAZONI I; et al.
added
11-Mar-13
publication(s)  
First Page Previous Page Page   of  1  Go Next Page Last Page
  Sort by:    Results per page: